Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889667.1_cds_XP_016444382.1_39449
CDS Infomation

[gene=LOC107769658] [db_xref=GeneID:107769658] [protein=protein SET DOMAIN GROUP 40-like] [protein_id=XP_016444382.1] [location=complement(join(30567..31232,31460..31726,32180..32320,32473..32604,33973..34123,34212..34354))] [gbkey=CDS]
Sequence

ATGGAAGAAGCATTGAACCTAAAGAGCTTCCTGCAATGGGCAGCTGATTTAGGAATCTCA
GACACTCCTTTAACTTCAACCCCTCAATCAGATTCATGTTTGGGACACTCCCTTTTTCTC
TCTAATTTCCCTGATGCCGGAGGGAGAGGTTTAGCAGCAGCTCGTGATATTAGGAAAGGG
GAATTGATTCTTAAAGTTCCAAACGGAGCGTTAATGACTAGTCAAAGCCTTATGATTAGC
GATGAGGTGCTGTCAATTGTTGTCAAGAAGCACCCTTCTCTCTCCTCCACTCAGATATTG
GCTGTTGCACTGTTAAATGAAGTGAACAAGGGAAAGAGTTCTCGGTGGTGGCCCTATCTA
AAACACTTCCCTCGCAGCTATGACACACTTGTGGATTTTGGCAAATTCGAGATACAAGCA
TTGCAAATTGATGATGCCATCTGGGCTGCACAAAAGGCTTCTCTGAAGGCCGAAGCAGAG
TGGAAAGAAGCTAGTGTGCTTATGCATGATCTCAAGCTCAAGCCACAGCTCCTGACTCTC
AAGGCTTGGGTGTGGGCCTCTGGTTCTATATCCTCGCGCACCATGCATATATCTTGGGAT
GAAGCTGGATGTTTATGCCCTGTGGGAGATTTCTTCAACTACGCAGCACCTGGAGAGGAA
ACATCTAATTCTGAAGATCAGGTTGCTGGAAAAGCCTTTTCTTTGCAAGAAGACCGTATG
CTTAAATCAGCAACTGATTTGGCCGCAGCCCATAGGCTAATAGATGCTGGATATGAGGAA
GACGTTTCTTCATACTGTATCTATGCTAGAAGAAACTACCAGAAAGGAGAACAGGTTCTG
CTAAGCTACGGAACCTACACAAATTTGGAGCTTCTTCAACATTATGGATTTCTTCTGACT
GACAACCTAAATGACAAGGCTTTTATACCTTTAGAACCAGATATGTATTCTCTCTGTTCA
TGGGAGAATGAGTTACTCTATATTCAGCCAGATGGGAAGCCATCCTTTGCGCTACTATCA
ACAGTGCGATTGTGGGCAGTCCCTCAAAAAAAGCGCAGGTCCCTTTTACACCTTGTTTAT
TCAGGAAACCGACTTTCAACACATAATGAAGTTGCTGCAATGAGATGGCTAGCAAAGAAA
TGCAGAACAACATTGGACATACTTCCAACTACTGCTGAAGAAGACGGTAAGTTACTCATC
ATCCTTGATAAATTTCAGGATATACATCAACTCGTGGAGATTGAAGAGATGCCGCCACCA
CTTGCTAGTGAGCTTTGTGCTTTCATGGAAAGCAAGGATATGCTTAGTGAAGACATTTAT
GTCCTGTCAAGTGTAGCTAGAAGGTCAATAGAGAGATGGAAGTTAGCAATTCAATGGAGA
CATCACTACAAAAAAATACTTTGCAATTGCATTATACATTGTACCGAGGTTATTAATGAA
ATTATTTCTTCAAAAGATTCTGAATACGAGGAAATCTTCATTAAGCCTATATTTAAGTAA

Peptide Sequence

PEP ID

XP_016444382.1
PEP Infomation

PREDICTED: protein SET DOMAIN GROUP 40-like [Nicotiana tabacum]
Sequence

MEEALNLKSFLQWAADLGISDTPLTSTPQSDSCLGHSLFLSNFPDAGGRGLAAARDIRKG
ELILKVPNGALMTSQSLMISDEVLSIVVKKHPSLSSTQILAVALLNEVNKGKSSRWWPYL
KHFPRSYDTLVDFGKFEIQALQIDDAIWAAQKASLKAEAEWKEASVLMHDLKLKPQLLTL
KAWVWASGSISSRTMHISWDEAGCLCPVGDFFNYAAPGEETSNSEDQVAGKAFSLQEDRM
LKSATDLAAAHRLIDAGYEEDVSSYCIYARRNYQKGEQVLLSYGTYTNLELLQHYGFLLT
DNLNDKAFIPLEPDMYSLCSWENELLYIQPDGKPSFALLSTVRLWAVPQKKRRSLLHLVY
SGNRLSTHNEVAAMRWLAKKCRTTLDILPTTAEEDGKLLIILDKFQDIHQLVEIEEMPPP
LASELCAFMESKDMLSEDIYVLSSVARRSIERWKLAIQWRHHYKKILCNCIIHCTEVINE
IISSKDSEYEEIFIKPIFK

Transcript Sequence

Gene sequence data has not been registered.